BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019H06SP1|AL427537
(881 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1793 1590 0.0
>3x_Contig1793
Length = 40499
Score = 1590 bits (792), Expect = 0.0
Identities = 856/885 (96%), Gaps = 4/885 (0%)
Strand = Plus / Minus
Query: 1 tttcttctcttgattcawatcacttcaatccgcaaattgctaagawataaacagtcaagc 60
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 4088 tttcttctcttgattcaaatcacttcaatccgcaaattgctaagaaataaacagtcaagc 4029
Query: 61 cattgacgaat--catatwttchwttcattttctcctataatwtgtcacctatcgcacac 118
|||||||||| ||||| ||| ||||||||||||||||| |||||||||||||||||
Sbjct: 4028 cattgacgaagtccatatattcaattcattttctcctataaaatgtcacctatcgcacac 3969
Query: 119 ttattgawtgccagttccggcactgattcaggtagtcatttgcgcgatatccatggtcat 178
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3968 ttattgaatgccagtaccggcactgattcaggtagtcatttgcgcgatatccatggtcat 3909
Query: 179 cacgatagtyacgatcacggttcggaggagcaggctgtcagtcctttgtctcctcgctcg 238
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3908 cacgatagtcacgatcacggttcggaggagcaggctgtcagtcctttgtctcctcgctcg 3849
Query: 239 tatccatctcctcgcagcaacagcagtwgtagctgcgaagagagtyaatcctcagctggg 298
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 3848 tatccatctcctcgcagcaacagcagtagtagctgcgaagagagtcaatcctcagctggg 3789
Query: 299 gttctagctaacattcataccggaccggcttcccctcatggaaaggcatgtgttgcgtct 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3788 gttctagctaacattcataccggaccggcttcccctcatggaaaggcatgtgttgcgtct 3729
Query: 359 tcacccctttccaccactggtatgagatctgcctctacgccttctagctctgacgaagat 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3728 tcacccctttccaccactggtatgagatctgcctctacgccttctagctctgacgaagat 3669
Query: 419 actgttcatttgcaccgctgccaatggaaaggctgtwgtttggagttcacttctcccgaa 478
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3668 actgttcatttgcaccgctgccaatggaaaggctgtagtttggagttcacttctcccgaa 3609
Query: 479 ctactttatcatcatctttgccaagatcatgttggccgtaaatcacagaagaatttgcaa 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3608 ctactttatcatcatctttgccaagatcatgttggccgtaaatcacagaagaatttgcaa 3549
Query: 539 ctgaactgtcaatggggcgattgtyagactaatacagttaamagagaccatatcacgtct 598
|||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||
Sbjct: 3548 ctgaactgtcaatggggcgattgtcagactaaaacagttaaaagagaccatatcacgtct 3489
Query: 599 catttgagagttcatgtgctattaatacctttcgcttgctccacttgttataaaatattc 658
||||||||||||||||||| ||||| |||||||||||||||||||||| |||||| ||||
Sbjct: 3488 catttgagagttcatgtgcaattaaaacctttcgcttgctccacttgtaataaaaaattc 3429
Query: 659 aaaasacctcaagatttaaagaaacatttgaaggtacataacgaagaactttcactactg 718
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3428 aaaagacctcaagatttaaagaaacatttgaaggtacataacgaagaactttcactactg 3369
Query: 719 -aaaaaaaaacgtggtccsaagccatccaataagctgggaaagatttcaaatgacagatc 777
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 3368 aaaaaaaaaacgtggtccgaagccatccaataagctgggaaagatttcaaatgacagatc 3309
Query: 778 ccstgctcatcagagattcactttaccatctatttctttggataaatttattcacgagga 837
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3308 ccgtgctcatcagagattcactttaccatctatttctttggataaatttattcacgagga 3249
Query: 838 ggtgaagactcaacaa-ccstgtactctcaacaattggcagaaaa 881
|||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 3248 ggtgaagactcaacaacccgtgtactctcaacaattggcagaaaa 3204
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5436
Number of Sequences: 1807
Number of extensions: 5436
Number of successful extensions: 114
Number of sequences better than 1.0e-20: 1
length of query: 881
length of database: 10,358,551
effective HSP length: 16
effective length of query: 865
effective length of database: 10,329,639
effective search space: 8935137735
effective search space used: 8935137735
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)